The detailed information of tRNA gene sequence


Sequence ID>WENV180057001
Genome IDMPLW02074185
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1458
End posion on genome 1534
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttcttctagt
tRNA gene sequence 
AGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCCACCA
Downstream region at tRNA end position 
gtatttgcaa
Secondary structure (Cloverleaf model)
>WENV180057001	fMet	CAT
                   t      ACCA gtatttgcaa
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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