The detailed information of tRNA gene sequence


Sequence ID>WENV180057058
Genome IDMPLW02077336
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 879
End posion on genome 803
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcacaagtgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
tttcatgaaa
Secondary structure (Cloverleaf model)
>WENV180057058	fMet	CAT
                   t      ACCA tttcatgaaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    C       C G A G       G C A G G     C
    A       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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