The detailed information of tRNA gene sequence


Sequence ID>WENV180057062
Genome IDMPLW02077469
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 743
End posion on genome 666
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agggatggcc
tRNA gene sequence 
AGCGAGTTTGAGTAGCCAGGTTATCTCGTCGGGCTCATAACCCGGAGACCGGTGGTTCAA
ATCCACCACTCGCTACCA
Downstream region at tRNA end position 
ttattatcca
Secondary structure (Cloverleaf model)
>WENV180057062	fMet	CAT
                   c      ACCA ttattatcca
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C A C C     A
    C C G A        T      | | | | |     A
  A         T G A G       G G T G G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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