The detailed information of tRNA gene sequence


Sequence ID>WENV180057178
Genome IDMPLW02084212
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 205
End posion on genome 115
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcttattta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGCTCCCCTGCTAAGGGAGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaggcttatt
Secondary structure (Cloverleaf model)
>WENV180057178	Ser	GCT
                   a      GCCA gaggcttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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