The detailed information of tRNA gene sequence


Sequence ID>WENV180057260
Genome IDMPLW02091074
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1111
End posion on genome 1187
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
acagaatcga
tRNA gene sequence 
TGCGGGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTCAGTTCAAA
TCTGGCCCCCGCTACCA
Downstream region at tRNA end position 
aataaaacaa
Secondary structure (Cloverleaf model)
>WENV180057260	fMet	CAT
                   a      ACCA aataaaacaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G T C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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