The detailed information of tRNA gene sequence


Sequence ID>WENV180057335
Genome IDMPLW02096705
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1811
End posion on genome 1721
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattaagaaa
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGCACGCTTGGAAAGCGTGTAAGGGTTAATAGCCC
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttaaaagctc
Secondary structure (Cloverleaf model)
>WENV180057335	Ser	GGA
                   a      GCCA ttaaaagctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TAAGGGTTAATAGCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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