The detailed information of tRNA gene sequence


Sequence ID>WENV180057819
Genome IDMPLX02023877
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 430
End posion on genome 338
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaatcgtt
tRNA gene sequence 
GGAGGCGTGGGAGAGTTGGTTTAATCCAGCAGTTTGCTAAATTGCCGTACGGTTAATTCC
GTACCGTTGGTTCGAATCCAACCGCCTCCGCCA
Downstream region at tRNA end position 
taggttatct
Secondary structure (Cloverleaf model)
>WENV180057819	Ser	GCT
                   t      GCCA taggttatct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A A C C     A
    T T G A        G      | | | | |     G
  G         G A G G       G T T G G     C
  G           | | |                 T T
  T         A T C C
    T T A          A     CGTACGGTTAATTCCGTACC
                    G - C
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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