The detailed information of tRNA gene sequence


Sequence ID>WENV180058093
Genome IDMPLX02036135
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1344
End posion on genome 1433
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attttgttcc
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCGTGATTGGAAATCACGTGTGCGGGCAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttccgcaccg
Secondary structure (Cloverleaf model)
>WENV180058093	Ser	GGA
                   c      GCCA ttccgcaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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