The detailed information of tRNA gene sequence


Sequence ID>WENV180058337
Genome IDMPLX02049200
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 202
End posion on genome 107
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatatatttt
tRNA gene sequence 
GGGAATGATTGAGTGGCTGGTGCTCTCCGCGGCCTTCAAAGCCGTTGTCCCCGGCAGTCC
CGGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttgaaaata
Secondary structure (Cloverleaf model)
>WENV180058337	SeC	TCA
                   t      GCCA tttgaaaata
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       T G A G       C T G G G     C
    G         | | |                 T T
    G       T C T C
      T G C        C     TGTCCCCGGCAGTCCCGGGGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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