The detailed information of tRNA gene sequence


Sequence ID>WENV180058861
Genome IDMPLX02077669
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1442
End posion on genome 1353
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttagaaac
tRNA gene sequence 
GGAGAGATGTGAGAGCGGTTTAATCAGCACGCTTGGAAAGCGTGTATAGTGGCAACACTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaactcctg
Secondary structure (Cloverleaf model)
>WENV180058861	Ser	GGA
                   c      GCCA aaaactcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G T       G A G G G     C
    G         | | |                 T T
    T       A T C A
      T T A        G     TATAGTGGCAACACTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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