The detailed information of tRNA gene sequence


Sequence ID>WENV180058948
Genome IDMPLX02082248
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1219
End posion on genome 1143
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agttggtcaa
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGGAGTTCAAA
TCTCCCCCCCGCCACCA
Downstream region at tRNA end position 
aatcaagaag
Secondary structure (Cloverleaf model)
>WENV180058948	fMet	CAT
                   a      ACCA aatcaagaag
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       C G A G       G G G A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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