The detailed information of tRNA gene sequence


Sequence ID>WENV180059030
Genome IDMPLX02086593
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1048
End posion on genome 957
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttggttattt
tRNA gene sequence 
GGAAGAGTGGGTGAGCGGTTGAAACCAGTTGGTTGCTAACTAACCGTACGAGTAACATCG
TACCGAGAGTTCGAATCTCTCCTCTTCCGCCA
Downstream region at tRNA end position 
aagttaatta
Secondary structure (Cloverleaf model)
>WENV180059030	Ser	GCT
                   t      GCCA aagttaatta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T G A        A     CGTACGAGTAACATCGTACC
                    G - C
                    T - A
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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