The detailed information of tRNA gene sequence


Sequence ID>WENV180060217
Genome IDMPLX02157512
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 23715
End posion on genome 23639
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttggagctgc
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGGAGTTCAAA
TCTCCCCCCCGCCACCA
Downstream region at tRNA end position 
aatcagaaaa
Secondary structure (Cloverleaf model)
>WENV180060217	fMet	CAT
                   c      ACCA aatcagaaaa
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       C G A G       G G G A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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