The detailed information of tRNA gene sequence


Sequence ID>WENV180063113
Genome IDMPLX02332102
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 22224
End posion on genome 22313
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaattatca
tRNA gene sequence 
AGAGAGGTGGCCGAGCGGTTTAAGGCGCGCGCTTGGAAAGCGTGTATTCTGAGAAATTGG
AATCGAGGGTTCGAATCCCTTCCTCTCTGCta
Downstream region at tRNA end position 
agttgttttt
Secondary structure (Cloverleaf model)
>WENV180063113	Ser	GGA
                   a      GCta agttgttttt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATTCTGAGAAATTGGAATC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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