The detailed information of tRNA gene sequence


Sequence ID>WENV180063919
Genome IDMPLX02383092
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 165
End posion on genome 250
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attaattatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTAGAACGCAAGTTCAC
GCAGGTTCGAATCCTGTCCTCTCCGCaa
Downstream region at tRNA end position 
tatttaaaaa
Secondary structure (Cloverleaf model)
>WENV180063919	Ser	GGA
                   t      GCaa tatttaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TAGAACGCAAGTTCAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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