The detailed information of tRNA gene sequence


Sequence ID>WENV180064168
Genome IDMPLX02398940
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 72977
End posion on genome 73066
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatgtgttaa
tRNA gene sequence 
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCGTGGGTTCGAATCCCACACCTTCCGCCA
Downstream region at tRNA end position 
attccaaaag
Secondary structure (Cloverleaf model)
>WENV180064168	Ser	CGA
                   a      GCCA attccaaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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