The detailed information of tRNA gene sequence


Sequence ID>WENV180064543
Genome IDMPLY02005786
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 389
End posion on genome 465
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cccttgttgt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGATGGGCTCATAACCCATAGGTCGTAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
caatttgaga
Secondary structure (Cloverleaf model)
>WENV180064543	fMet	CAT
                   t      ACCA caatttgaga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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