The detailed information of tRNA gene sequence


Sequence ID>WENV180064564
Genome IDMPLY02007881
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 46
End posion on genome 143
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gcacctcggg
tRNA gene sequence 
GGGAGTGGATCCGTGCTGGTGTGCGGCCCGGTCTTCAAAGCCGGTTGGGTTTCGTGAACA
GCGGGACCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
tccctgcgcc
Secondary structure (Cloverleaf model)
>WENV180064564	SeC	TCA
                   g      GCCA tccctgcgcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C G        T      + | | | |     G
    G       T G C C       G T G G G     C
    G       + | | |                 T T
    T       G C G G
      G T          C     TTGGGTTTCGTGAACAGCGGGACCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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