The detailed information of tRNA gene sequence


Sequence ID>WENV180064742
Genome IDMPLY02019194
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1102
End posion on genome 1192
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cattaagaaa
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGCACGCTTGGAAAGCGTGTAAGGGTTAATAGCCC
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttaaaagctc
Secondary structure (Cloverleaf model)
>WENV180064742	Ser	GGA
                   a      GCCA ttaaaagctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TAAGGGTTAATAGCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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