The detailed information of tRNA gene sequence


Sequence ID>WENV180064802
Genome IDMPLY02023179
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 422
End posion on genome 327
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttcaacatcc
tRNA gene sequence 
cGGAGAGTGAAGGGTGCCTGGTGGTCCCCGCGGTCTTCAAAACCGTTGTCGGTTCGTGAA
CGGGCCGAGGTAGGTTCGATTCCTACCCTCTCCGCCAa
Downstream region at tRNA end position 
tttctatccc
Secondary structure (Cloverleaf model)
>WENV180064802	SeC	TCA
                   c      CCAa tttctatccc
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C A T C C     A
    C C G T        A      | | | | |     G
  T         G G G A       G T A G G     C
  G         + | |                   T T
  G         T C C C
    T G G          C     TGTCGGTTCGTGAACGGGCCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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