The detailed information of tRNA gene sequence


Sequence ID>WENV180064879
Genome IDMPLY02028049
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 338
End posion on genome 430
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctccgcctgc
tRNA gene sequence 
GGAGGGGTGCTAGAGTGGACGAATAGGGCGGCCTGCTAAGCCGTTGCATCGGTAACCCCG
GTGCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tatgatctgg
Secondary structure (Cloverleaf model)
>WENV180064879	Ser	GCT
                   c      GCCA tatgatctgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G T G G G     C
    G         | | |                 T T
    A       A T A G
      C G A        G     TGCATCGGTAACCCCGGTGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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