The detailed information of tRNA gene sequence


Sequence ID>WENV180065088
Genome IDMPLY02040732
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 430
End posion on genome 525
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
actcaacaca
tRNA gene sequence 
GGAGAGTGAAAGGTGGCTGGTGCTCCTCGCGGTCTTCAAAACCGTTGTCGGTTCGTGAAC
GGGCCGAGGTAGGTTCGATTCCTACCCTCTCCGCCA
Downstream region at tRNA end position 
attttccttc
Secondary structure (Cloverleaf model)
>WENV180065088	SeC	TCA
                   a      GCCA attttccttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C A T C C     A
    C G G T        A      | | | | |     G
  T         G G A A       G T A G G     C
  G         + |   |                 T T
  G         T C C T
    T G C          C     TGTCGGTTCGTGAACGGGCCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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