The detailed information of tRNA gene sequence


Sequence ID>WENV180065143
Genome IDMPLY02043605
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2838
End posion on genome 2928
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgccctac
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aacaacccac
Secondary structure (Cloverleaf model)
>WENV180065143	Ser	GGA
                   c      GCCA aacaacccac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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