The detailed information of tRNA gene sequence


Sequence ID>WENV180065262
Genome IDMPLY02051850
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 107
End posion on genome 14
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacatagaa
tRNA gene sequence 
GGAGAGTTGGGTGAGTTTGGTTTAAACCAGCAGGTTGCTAACTTGTCGTGCGTCGAAAGA
TGTACCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
ttagtataaa
Secondary structure (Cloverleaf model)
>WENV180065262	Ser	GCT
                   a      GCCA ttagtataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  T         G T G G       G T G G G     C
  G           | | |                 T T
  G         A A C C
    T T T A        A     CGTGCGTCGAAAGATGTACC
                    G + T
                    C - G
                    A - T
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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