The detailed information of tRNA gene sequence


Sequence ID>WENV180065452
Genome IDMPLY02064155
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 273
End posion on genome 176
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tagacggcac
tRNA gene sequence 
GGGAGCGAATGAGTCCTGGTGGGCTTCGCGGACTTCAAATCCGTTGGCCCCGGCCCTTCG
GTCGGGGCGGTGGGTTCGACTCCCTCTCGCTCCCGCCA
Downstream region at tRNA end position 
gctttttata
Secondary structure (Cloverleaf model)
>WENV180065452	SeC	TCA
                   c      GCCA gctttttata
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    A     C T C C C     A
      T C C        T      |   | | |     G
    G       T G A G       G T G G G     C
    G       + | | +                 T T
    T       G C T T
      G G          C     TGGCCCCGGCCCTTCGGTCGGGGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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