The detailed information of tRNA gene sequence


Sequence ID>WENV180065465
Genome IDMPLY02065034
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 6408
End posion on genome 6310
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
catcgagatt
tRNA gene sequence 
GGAAGCGTTCCCAAGGCTGGTGCCTGGCTCGGACTTCAAATCCGATGGGGGGCGCGGCGA
CGCGTCCCCGGCGGGTTCGATTCCCGTCCGCTTCCGCCA
Downstream region at tRNA end position 
ccgatccgaa
Secondary structure (Cloverleaf model)
>WENV180065465	SeC	TCA
                   t      GCCA ccgatccgaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G C C C     A
      C G G        C      + | | | |     G
    T       A A C C       G C G G G     C
    G         | | |                 T T
    G       C T G G
      T G C        C     TGGGGGGCGCGGCGACGCGTCCCCG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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