The detailed information of tRNA gene sequence


Sequence ID>WENV180065685
Genome IDMPLY02080590
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 230
End posion on genome 319
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgtcaacgt
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTTTATCGGGCTCGCCTGGAAAGCGTGTAAAGGGGCAACCCTT
TCGTGGGTTCGAATCCCAACCTCTCCGCCA
Downstream region at tRNA end position 
ctcacccgca
Secondary structure (Cloverleaf model)
>WENV180065685	Ser	GGA
                   t      GCCA ctcacccgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     A A C C C     A
      T G A        G        | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T T A        G     TAAAGGGGCAACCCTTTC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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