The detailed information of tRNA gene sequence


Sequence ID>WENV180066002
Genome IDMPLY02101754
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 9702
End posion on genome 9610
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccctgatttc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTTTGTAGCC
TCATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatctttttt
Secondary structure (Cloverleaf model)
>WENV180066002	Ser	GCT
                   c      GCCA gatctttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGTTTGTAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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