The detailed information of tRNA gene sequence


Sequence ID>WENV180066014
Genome IDMPLY02102373
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 38898
End posion on genome 38807
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtagctactt
tRNA gene sequence 
GGAGGGGTGCCAGAGTGGCTGAATGGGACGGATTGCTAATCCGTTATGCGGGTTAAACCG
CATCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
gttggaaaaa
Secondary structure (Cloverleaf model)
>WENV180066014	Ser	GCT
                   t      GCCA gttggaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    C       A T G G
      T G A        G     TATGCGGGTTAAACCGCATC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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