The detailed information of tRNA gene sequence


Sequence ID>WENV180066154
Genome IDMPLY02112861
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3354
End posion on genome 3428
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattaatgat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCAAA
TCCTGTCCCCGCTACaa
Downstream region at tRNA end position 
tgaaaacccg
Secondary structure (Cloverleaf model)
>WENV180066154	fMet	CAT
                   t      ACaa tgaaaacccg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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