The detailed information of tRNA gene sequence


Sequence ID>WENV180066367
Genome IDMPLY02126058
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 753
End posion on genome 680
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnncttcgac
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCGAA
TCCTGCCCCCGCTAttg
Downstream region at tRNA end position 
caagcagccc
Secondary structure (Cloverleaf model)
>WENV180066367	fMet	CAT
                   c      Attg caagcagccc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | + | | |     G
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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