The detailed information of tRNA gene sequence


Sequence ID>WENV180066831
Genome IDMPLY02158327
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 667
End posion on genome 591
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaagacaaga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
atcctttcaa
Secondary structure (Cloverleaf model)
>WENV180066831	fMet	CAT
                   a      ACCA atcctttcaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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