The detailed information of tRNA gene sequence


Sequence ID>WENV180066868
Genome IDMPLY02160668
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 229
End posion on genome 318
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tataggaact
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGTTGATACCAGCTGGTTGCTAACTAGCCGTAGTTTAACGACTA
CCGAGAGTTCTAATCTCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaaactaatt
Secondary structure (Cloverleaf model)
>WENV180066868	Ser	GCT
                   t      GCCA aaaactaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     T
    G       G T G G       G A G A G     C
    G       + | | |                 T T
    T       T A C C
      T G A        A     CGTAGTTTAACGACTACC
                    G - C
                    C - G
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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