The detailed information of tRNA gene sequence


Sequence ID>WENV180067114
Genome IDMPLY02179988
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 17297
End posion on genome 17386
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cggcccgctc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATAGGTTAACGCCTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ctttttctaa
Secondary structure (Cloverleaf model)
>WENV180067114	Ser	GCT
                   c      GCCA ctttttctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATAGGTTAACGCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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