The detailed information of tRNA gene sequence


Sequence ID>WENV180067186
Genome IDMPLY02185023
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 336
End posion on genome 242
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccataatttt
tRNA gene sequence 
GGAAGCGAATGTGACCCTGGTGGGCACCACAGCCTTCAAAGCTGATGTCTCGGGTTAAAC
CGAGAGGTGGGTTCGATTCCCACGCGTTTCCGCCA
Downstream region at tRNA end position 
attaagagaa
Secondary structure (Cloverleaf model)
>WENV180067186	SeC	TCA
                   t      GCCA attaagagaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     A   G          T T
                    A     C A C C C     A
      C C C        T      | | | | |     G
    T       A G T G       G T G G G     C
    G         | | |                 T T
    G       G C A C
      T G G        C     TGTCTCGGGTTAAACCGAGAG
                    A   A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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