The detailed information of tRNA gene sequence


Sequence ID>WENV180067259
Genome IDMPLY02190209
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 509
End posion on genome 420
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaactcaat
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGTGTGTGTACTGTCAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aataatagta
Secondary structure (Cloverleaf model)
>WENV180067259	Ser	GGA
                   t      GCCA aataatagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACTGTCAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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