The detailed information of tRNA gene sequence


Sequence ID>WENV180067415
Genome IDMPLY02199971
Search identical group
Phylum/Class[MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 368
End posion on genome 467
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cagaacactg
tRNA gene sequence 
GGAAGTGTTTGCACACCTGGTGGTGGCCGCGGTCTTCAAAACCGTTGGGCGGTGCGTAAA
TCGTATTGCCAGTGGGTTCGATTCCCATACACTTCCGCCA
Downstream region at tRNA end position 
ttttggataa
Secondary structure (Cloverleaf model)
>WENV180067415	SeC	TCA
                   g      GCCA ttttggataa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T T
                    T     T A C C C     A
      C C A        T      + | | | |     G
    T       C A C G       G T G G G     C
    G           | |                 T T
    G       T G G C
      T G G        C     TGGGCGGTGCGTAAATCGTATTGCCA
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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