The detailed information of tRNA gene sequence


Sequence ID>WENV180068165
Genome IDMPLZ02034104
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 17494
End posion on genome 17402
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacctgaatt
tRNA gene sequence 
GGAAGCGTGGGTGAGCTGGTTTAAACCAACGGATTGCTAATTCGTCGATGGTCGTAAGAT
CATCCAAGAGTTCGAATCTCTTCGCTTCCGCCA
Downstream region at tRNA end position 
ggttaattta
Secondary structure (Cloverleaf model)
>WENV180068165	Ser	GCT
                   t      GCCA ggttaattta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T T C T C     A
    T C G A        G      | | | | |     G
  G         G T G G       A A G A G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGATGGTCGTAAGATCATCC
                    A - T
                    C - G
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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