The detailed information of tRNA gene sequence


Sequence ID>WENV180068337
Genome IDMPLZ02042727
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 861
End posion on genome 768
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagactatta
tRNA gene sequence 
GGAAGCGTGGGTGAGCCTGGCTTAAACCAACAGTTTGCTAAATTGTCATAGGGTTAATTC
CCTATCATCCGTTCAAATCGGATCGCTTCCGCCA
Downstream region at tRNA end position 
taaataacaa
Secondary structure (Cloverleaf model)
>WENV180068337	Ser	GCT
                   a      GCCA taaataacaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T A G G C     A
    C C G A        G      | | | | |     A
  T         G T G G       A T C C G     C
  G           | | |                 T T
  G         A A C C
    C T T A        A     CATAGGGTTAATTCCCTATC
                    A - T
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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