The detailed information of tRNA gene sequence


Sequence ID>WENV180068360
Genome IDMPLZ02043934
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1070
End posion on genome 1166
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgctgctggc
tRNA gene sequence 
GGGGATGGTTGAGTCCCGGTGGGCTCCGCGGTCTTCAAAACCGTTGGTGGGTCGCCCGAG
CGAGCCACGGTGGGTTCGACACCCATCCATCCCCGCCt
Downstream region at tRNA end position 
cttatcgcgt
Secondary structure (Cloverleaf model)
>WENV180068360	SeC	TCA
                   c      GCCt cttatcgcgt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C          A C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TGGTGGGTCGCCCGAGCGAGCCACG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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