The detailed information of tRNA gene sequence


Sequence ID>WENV180069072
Genome IDMPLZ02083579
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5814
End posion on genome 5907
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccattattat
tRNA gene sequence 
GGAAGGATGGGTGAGTTGGTTTAAACCAGGAGTTTGCTAAACTTCCGTAGGTTATAATGA
CCTACCGAGGGTTCGAATCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
caaaaactaa
Secondary structure (Cloverleaf model)
>WENV180069072	Ser	GCT
                   t      GCCA caaaaactaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTAGGTTATAATGACCTACC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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