The detailed information of tRNA gene sequence


Sequence ID>WENV180069317
Genome IDMPLZ02099784
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1332
End posion on genome 1256
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttaaatttat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
attgagacgc
Secondary structure (Cloverleaf model)
>WENV180069317	fMet	CAT
                   t      ACCA attgagacgc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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