The detailed information of tRNA gene sequence


Sequence ID>WENV180069830
Genome IDMPLZ02132349
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 147
End posion on genome 241
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccataagatt
tRNA gene sequence 
GGAAGCGAATGTGACCCTGGTGGGCACCACAGCCTTCAAAGCTGATGTGTGGCAGTGATG
TCATAGGTGAGTTCGATTCTCACGCGTTTCCGCCA
Downstream region at tRNA end position 
attaagagga
Secondary structure (Cloverleaf model)
>WENV180069830	SeC	TCA
                   t      GCCA attaagagga
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     A   G          T T
                    A     C A C T C     A
      C C C        T      | | | | |     G
    T       A G T G       G T G A G     C
    G         | | |                 T T
    G       G C A C
      T G G        C     TGTGTGGCAGTGATGTCATAG
                    A   A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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