The detailed information of tRNA gene sequence


Sequence ID>WENV180069839
Genome IDMPLZ02133082
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 455
End posion on genome 380
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaacggcgc
tRNA gene sequence 
AGGAGTGTAGCTCAGCTGGCAGAGCGGCGGTCTCCAAAACCGTAGGTCGGGGGTTCGAAT
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
ttaccgccgg
Secondary structure (Cloverleaf model)
>WENV180069839	Trp	CCA
                   c      GCCA ttaccgccgg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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