The detailed information of tRNA gene sequence


Sequence ID>WENV180070064
Genome IDMPLZ02147180
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 3330
End posion on genome 3238
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catccattgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATGCGGTTTAACACC
GTATCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ataacagaga
Secondary structure (Cloverleaf model)
>WENV180070064	Ser	GCT
                   c      GCCA ataacagaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGTTTAACACCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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