The detailed information of tRNA gene sequence


Sequence ID>WENV180070121
Genome IDMPLZ02150624
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1604
End posion on genome 1527
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gaagcagcgt
tRNA gene sequence 
AGCGGGGTGGGGTAGCTAGGAAATCCCGTCGGGCTCATAACCCGGAGATCGATGGTTCAA
ATCCATCCCCCGCTACCA
Downstream region at tRNA end position 
cttttactgc
Secondary structure (Cloverleaf model)
>WENV180070121	fMet	CAT
                   t      ACCA cttttactgc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T A C C     A
    T C G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGATC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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