The detailed information of tRNA gene sequence


Sequence ID>WENV180070146
Genome IDMPLZ02151907
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 90634
End posion on genome 90710
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcctcctcgc
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
agcgaaaggc
Secondary structure (Cloverleaf model)
>WENV180070146	fMet	CAT
                   c      ACCA agcgaaaggc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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