The detailed information of tRNA gene sequence


Sequence ID>WENV180070147
Genome IDMPLZ02151907
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 17952
End posion on genome 17857
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgtcagcgcc
tRNA gene sequence 
GGAGGTGTCTGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGGGACGGGCGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
cgcctccgcc
Secondary structure (Cloverleaf model)
>WENV180070147	SeC	TCA
                   c      GCCA cgcctccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        T      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGGGACGGGCGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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