The detailed information of tRNA gene sequence


Sequence ID>WENV180070228
Genome IDMPLZ02156176
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 305
End posion on genome 399
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccgaatagat
tRNA gene sequence 
GGGAGCGGTTAAGTCCCGGTGGGCTTCGCGGACTTCAAATCCGTTGGGGGGTATTATATA
TCTTCGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
gtaatctgcc
Secondary structure (Cloverleaf model)
>WENV180070228	SeC	TCA
                   t      GCCA gtaatctgcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A A       G T G G G     C
    G       + | | |                 T T
    T       G C T T
      G G          C     TGGGGGGTATTATATATCTTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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