The detailed information of tRNA gene sequence


Sequence ID>WENV180070317
Genome IDMPLZ02161351
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 82
End posion on genome 158
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aactgattat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCAACCA
Downstream region at tRNA end position 
attttttcta
Secondary structure (Cloverleaf model)
>WENV180070317	fMet	CAT
                   t      ACCA attttttcta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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